Analysis of the genome of leporid herpesvirus 4.
| Title | Analysis of the genome of leporid herpesvirus 4. |
| Publication Type | Journal Article |
| Year of Publication | 2012 |
| Authors | Babra B, Watson G, Xu W, Jeffrey BM, Xu J-R, Rockey DD, Rohrmann GF, Jin L |
| Journal | Virology |
| Volume | 433 |
| Issue | 1 |
| Pagination | 183-91 |
| Date Published | 2012 Nov 10 |
| ISSN | 1096-0341 |
| Keywords | Animals, Base Composition, Cells, Cultured, DNA, Viral, Genome Size, Genome, Viral, High-Throughput Nucleotide Sequencing, Humans, Inverted Repeat Sequences, Molecular Sequence Data, Open Reading Frames, Phylogeny, Rabbits, Restriction Mapping, Sequence Analysis, DNA, Simplexvirus, Viral Proteins |
| Abstract | The genome of a herpesvirus highly pathogenic to rabbits, leporid herpesvirus 4 (LHV-4), was analyzed using high-throughput DNA sequencing technology and primer walking. The assembled DNA sequences were further verified by restriction endonuclease digestion and Southern blot analyses. The total length of the LHV-4 genome was determined to be about 124 kb. Genes encoded in the LHV-4 genome are most closely related to herpesvirus of the Simplexvirus genus, including human herpesviruses (HHV-1 and HHV-2), monkey herpesviruses including cercopithicine (CeHV-2 and CeHV-16), macacine (McHV-1), bovine herpesvirus 2 (BHV-2), and a lineage of wallaby (macropodid) herpesviruses (MaHV-1 and -2). Similar to other simplexvirus genomes, LHV-4 has a high overall G+C content of 65-70% in the unique regions and 75-77% in the inverted repeat regions. Orthologs of ICP34.5 and US5 were not identified in the LHV-4 genome. This study shows that LHV-4 has the smallest simplexvirus genome characterized to date. |
| DOI | 10.1016/j.virol.2012.08.002 |
| Alternate Journal | Virology |






