Journal Article
Y. Hou, Liu, M., Husted, C., Chen, C., Thiagarajan, K., Johns, J. L., Rao, S. P., and Alvira, C. M.,
“Activation of the nuclear factor-κB pathway during postnatal lung inflammation preserves alveolarization by suppressing macrophage inflammatory protein-2.”,
Am J Physiol Lung Cell Mol Physiol, vol. 309, no. 6, pp. L593-604, 2015.
R. L. Greer, Dong, X., Moraes, A. Carolina F., Zielke, R. A., Fernandes, G. R., Peremyslova, E., Vasquez-Perez, S., Schoenborn, A. A., Gomes, E. P., Pereira, A. C., Ferreira, S. R. G., Yao, M., Fuss, I. J., Strober, W., Sikora, A. E., Taylor, G. A., Gulati, A. S., Morgun, A., and Shulzhenko, N.,
“Akkermansia muciniphila mediates negative effects of IFNγ on glucose metabolism.”,
Nat Commun, vol. 7, p. 13329, 2016.
D. Borjesson, Macnamara, K., Johns, J. L., and Winslow, G.,
“Anaplasma phagocytophilum and Ehrlichia muris induce cytopenias and global defects in hematopoiesis.”,
Clin Microbiol Infect, vol. 15 Suppl 2, pp. 66-7, 2009.
G. Chen, Severo, M. S., Sakhon, O. S., Choy, A., Herron, M. J., Felsheim, R. F., Wiryawan, H., Liao, J., Johns, J. L., Munderloh, U. G., Sutterwala, F. S., Kotsyfakis, M., and Pedra, J. H. F.,
“Anaplasma phagocytophilum dihydrolipoamide dehydrogenase 1 affects host-derived immunopathology during microbial colonization.”,
Infect Immun, vol. 80, no. 9, pp. 3194-205, 2012.
X. Gao, Ran, N., Dong, X., Zuo, B., Yang, R., Zhou, Q., Moulton, H. M., Seow, Y., and Yin, H.,
“Anchor peptide captures, targets, and loads exosomes of diverse origins for diagnostics and therapy.”,
Sci Transl Med, vol. 10, no. 444, 2018.
E. S. Gold, Ramsey, S. A., Sartain, M. J., Selinummi, J., Podolsky, I., Rodriguez, D. J., Moritz, R. L., and Aderem, A.,
“ATF3 protects against atherosclerosis by suppressing 25-hydroxycholesterol-induced lipid body formation.”,
J Exp Med, vol. 209, no. 4, pp. 807-17, 2012.
Y. Vengrenyuk, Nishi, H., Long, X., Ouimet, M., Savji, N., Martinez, F. O., Cassella, C. P., Moore, K. J., Ramsey, S. A., Miano, J. M., and Fisher, E. A.,
“Cholesterol loading reprograms the microRNA-143/145-myocardin axis to convert aortic smooth muscle cells to a dysfunctional macrophage-like phenotype.”,
Arterioscler Thromb Vasc Biol, vol. 35, no. 3, pp. 535-46, 2015.
M. Bodogai, O'Connell, J., Kim, K., Kim, Y., Moritoh, K., Chen, C., Gusev, F., Vaughan, K., Shulzhenko, N., Mattison, J. A., Lee-Chang, C., Chen, W., Carlson, O., Becker, K. G., Gurung, M., Morgun, A., White, J., Meade, T., Perdue, K., Mack, M., Ferrucci, L., Trinchieri, G., de Cabo, R., Rogaev, E., Egan, J., Wu, J., and Biragyn, A.,
“Commensal bacteria contribute to insulin resistance in aging by activating innate B1a cells.”,
Sci Transl Med, vol. 10, no. 467, 2018.
B. P. Dolan, Li, L., Veltri, C. A., Ireland, C. M., Bennink, J. R., and Yewdell, J. W.,
“Distinct pathways generate peptides from defective ribosomal products for CD8+ T cell immunosurveillance.”,
J Immunol, vol. 186, no. 4, pp. 2065-72, 2011.
A. Márquez Loza, Elias, V., Wong, C. P., Ho, E., Bermudez, M., and Magnusson, K. R.,
“Effects of ibuprofen on cognition and NMDA receptor subunit expression across aging.”,
Neuroscience, vol. 344, pp. 276-292, 2017.
L. Babrak, Danelishvili, L., Rose, S. J., Kornberg, T., and Bermudez, L. E.,
“The environment of "Mycobacterium avium subsp. hominissuis" microaggregates induces synthesis of small proteins associated with efficient infection of respiratory epithelial cells.”,
Infect Immun, vol. 83, no. 2, pp. 625-36, 2015.
S. A. Ramsey, Vengrenyuk, Y., Menon, P., Podolsky, I., Feig, J. E., Aderem, A., Fisher, E. A., and Gold, E. S.,
“Epigenome-guided analysis of the transcriptome of plaque macrophages during atherosclerosis regression reveals activation of the Wnt signaling pathway.”,
PLoS Genet, vol. 10, no. 12, p. e1004828, 2014.
L. Louis Seifert, Si, C., Saha, D., Sadic, M., de Vries, M., Ballentine, S., Briley, A., Wang, G., Valero-Jimenez, A. M., Mohamed, A., Schaefer, U., Moulton, H. M., García-Sastre, A., Tripathi, S., Rosenberg, B. R., and Dittmann, M.,
“The ETS transcription factor ELF1 regulates a broadly antiviral program distinct from the type I interferon response.”,
PLoS Pathog, vol. 15, no. 11, p. e1007634, 2019.
T. Dam, Danelishvili, L., Wu, M., and Bermudez, L. E.,
“The fadD2 gene is required for efficient Mycobacterium avium invasion of mucosal epithelial cells.”,
J Infect Dis, vol. 193, no. 8, pp. 1135-42, 2006.
V. Litvak, Ramsey, S. A., Rust, A. G., Zak, D. E., Kennedy, K. A., Lampano, A. E., Nykter, M., Shmulevich, I., and Aderem, A.,
“Function of C/EBPdelta in a regulatory circuit that discriminates between transient and persistent TLR4-induced signals.”,
Nat Immunol, vol. 10, no. 4, pp. 437-43, 2009.
H. Yin, Moulton, H. M., Betts, C., Merritt, T., Seow, Y., Ashraf, S., Wang, Q., Boutilier, J., and Wood, M. Ja,
“Functional rescue of dystrophin-deficient mdx mice by a chimeric peptide-PMO.”,
Mol Ther, vol. 18, no. 10, pp. 1822-9, 2010.
B. Koscsó, Kurapati, S., Rodrigues, R. R., Nedjic, J., Gowda, K., Shin, C., Soni, C., Ashraf, A. Zaffran, Purushothaman, I., Palisoc, M., Xu, S., Sun, H., Chodisetti, S. Babu, Lin, E., Mack, M., Kawasawa, Y. Imamura, He, P., Rahman, Z. S. M., Aifantis, I., Shulzhenko, N., Morgun, A., and Bogunovic, M.,
“Gut-resident CX3CR1 macrophages induce tertiary lymphoid structures and IgA response in situ.”,
Sci Immunol, vol. 5, no. 46, 2020.
D. Bestle, Limburg, H., Kruhl, D., Harbig, A., Stein, D. A., Moulton, H. M., Matrosovich, M., Abdelwhab, E. M., Stech, J., and Böttcher-Friebertshäuser, E.,
“Hemagglutinins of Avian Influenza Viruses Are Proteolytically Activated by TMPRSS2 in Human and Murine Airway Cells.”,
J Virol, vol. 95, no. 20, p. e0090621, 2021.
D. R. Zamzow, Elias, V., Acosta, V. A., Escobedo, E., and Magnusson, K. R.,
“Higher levels of phosphorylated Y1472 on GluN2B subunits in the frontal cortex of aged mice are associated with good spatial reference memory, but not cognitive flexibility.”,
Age (Dordr), vol. 38, no. 3, p. 50, 2016.
D. R. Zamzow, Elias, V., Acosta, V. A., Escobedo, E., and Magnusson, K. R.,
“Higher Levels of Protein Palmitoylation in the Frontal Cortex across Aging Were Associated with Reference Memory and Executive Function Declines.”,
eNeuro, vol. 6, no. 1, 2019.
L. Danelishvili, Poort, M. J., and Bermudez, L. E.,
“Identification of Mycobacterium avium genes up-regulated in cultured macrophages and in mice.”,
FEMS Microbiol Lett, vol. 239, no. 1, pp. 41-9, 2004.
Y. -jun Li, Danelishvili, L., Wagner, D., Petrofsky, M., and Bermudez, L. E.,
“Identification of virulence determinants of Mycobacterium avium that impact on the ability to resist host killing mechanisms.”,
J Med Microbiol, vol. 59, no. Pt 1, pp. 8-16, 2010.
Y. Zhang, Bobe, G., Revel, J. S., Rodrigues, R. R., Sharpton, T. J., Fantacone, M. L., Raslan, K., Miranda, C. L., Lowry, M. B., Blakemore, P. R., Morgun, A., Shulzhenko, N., Maier, C. S., Stevens, J. F., and Gombart, A. F.,
“Improvements in Metabolic Syndrome by Xanthohumol Derivatives Are Linked to Altered Gut Microbiota and Bile Acid Metabolism.”,
Mol Nutr Food Res, vol. 64, no. 1, p. e1900789, 2020.
M. L. Kent, Watral, V., Wu, M., and Bermudez, L. E.,
“In vivo and in vitro growth of Mycobacterium marinum at homoeothermic temperatures.”,
FEMS Microbiol Lett, vol. 257, no. 1, pp. 69-75, 2006.
L. Danelishvili, Young, L. S., and Bermudez, L. E.,
“In vivo efficacy of phage therapy for Mycobacterium avium infection as delivered by a nonvirulent mycobacterium.”,
Microb Drug Resist, vol. 12, no. 1, pp. 1-6, 2006.