Carlson College of Veterinary Medicine

B. Wu, Cloer, C., Lu, P., Milazi, S., Shaban, M., Shah, S. N., Marston-Poe, L., Moulton, H. M., and Lu, Q. L., “Exon skipping restores dystrophin expression, but fails to prevent disease progression in later stage dystrophic dko mice.”, Gene Ther, vol. 21, no. 9, pp. 785-93, 2014.

A. J. Singh, Chang, C. - N., Ma, H. - Y., Ramsey, S. A., Filtz, T. M., and Kioussi, C., “FACS-Seq analysis of Pax3-derived cells identifies non-myogenic lineages in the embryonic forelimb.”, Sci Rep, vol. 8, no. 1, p. 7670, 2018.

T. Dam, Danelishvili, L., Wu, M., and Bermudez, L. E., “The fadD2 gene is required for efficient Mycobacterium avium invasion of mucosal epithelial cells.”, J Infect Dis, vol. 193, no. 8, pp. 1135-42, 2006.

V. Litvak, Ramsey, S. A., Rust, A. G., Zak, D. E., Kennedy, K. A., Lampano, A. E., Nykter, M., Shmulevich, I., and Aderem, A., “Function of C/EBPdelta in a regulatory circuit that discriminates between transient and persistent TLR4-induced signals.”, Nat Immunol, vol. 10, no. 4, pp. 437-43, 2009.

H. Yin, Moulton, H. M., Betts, C., Merritt, T., Seow, Y., Ashraf, S., Wang, Q., Boutilier, J., and Wood, M. Ja, “Functional rescue of dystrophin-deficient mdx mice by a chimeric peptide-PMO.”, Mol Ther, vol. 18, no. 10, pp. 1822-9, 2010.

M. Nykter, Price, N. D., Aldana, M., Ramsey, S. A., Kauffman, S. A., Hood, L. E., Yli-Harja, O., and Shmulevich, I., “Gene expression dynamics in the macrophage exhibit criticality.”, Proc Natl Acad Sci U S A, vol. 105, no. 6, pp. 1897-900, 2008.

S. A. Ramsey, Knijnenburg, T. A., Kennedy, K. A., Zak, D. E., Gilchrist, M., Gold, E. S., Johnson, C. D., Lampano, A. E., Litvak, V., Navarro, G., Stolyar, T., Aderem, A., and Shmulevich, I., “Genome-wide histone acetylation data improve prediction of mammalian transcription factor binding sites.”, Bioinformatics, vol. 26, no. 17, pp. 2071-5, 2010.

B. Koscsó, Kurapati, S., Rodrigues, R. R., Nedjic, J., Gowda, K., Shin, C., Soni, C., Ashraf, A. Zaffran, Purushothaman, I., Palisoc, M., Xu, S., Sun, H., Chodisetti, S. Babu, Lin, E., Mack, M., Kawasawa, Y. Imamura, He, P., Rahman, Z. S. M., Aifantis, I., Shulzhenko, N., Morgun, A., and Bogunovic, M., “Gut-resident CX3CR1 macrophages induce tertiary lymphoid structures and IgA response in situ.”, Sci Immunol, vol. 5, no. 46, 2020.

D. Bestle, Limburg, H., Kruhl, D., Harbig, A., Stein, D. A., Moulton, H. M., Matrosovich, M., Abdelwhab, E. M., Stech, J., and Böttcher-Friebertshäuser, E., “Hemagglutinins of Avian Influenza Viruses Are Proteolytically Activated by TMPRSS2 in Human and Murine Airway Cells.”, J Virol, vol. 95, no. 20, p. e0090621, 2021.

D. R. Zamzow, Elias, V., Acosta, V. A., Escobedo, E., and Magnusson, K. R., “Higher levels of phosphorylated Y1472 on GluN2B subunits in the frontal cortex of aged mice are associated with good spatial reference memory, but not cognitive flexibility.”, Age (Dordr), vol. 38, no. 3, p. 50, 2016.

R. J. Suchland, Jeffrey, B. M., Xia, M., Bhatia, A., Chu, H. G., Rockey, D. D., and Stamm, W. E., “Identification of concomitant infection with Chlamydia trachomatis IncA-negative mutant and wild-type strains by genomic, transcriptional, and biological characterizations.”, Infect Immun, vol. 76, no. 12, pp. 5438-46, 2008.

N. Motamedi, Danelishvili, L., and Bermudez, L. E., “Identification of Mycobacterium avium genes associated with resistance to host antimicrobial peptides.”, J Med Microbiol, vol. 63, no. Pt 7, pp. 923-930, 2014.

L. Danelishvili, Stang, B., and Bermudez, L. E., “Identification of Mycobacterium avium genes expressed during in vivo infection and the role of the oligopeptide transporter OppA in virulence.”, Microb Pathog, vol. 76, pp. 67-76, 2014.

L. Danelishvili, Poort, M. J., and Bermudez, L. E., “Identification of Mycobacterium avium genes up-regulated in cultured macrophages and in mice.”, FEMS Microbiol Lett, vol. 239, no. 1, pp. 41-9, 2004.

Y. -jun Li, Danelishvili, L., Wagner, D., Petrofsky, M., and Bermudez, L. E., “Identification of virulence determinants of Mycobacterium avium that impact on the ability to resist host killing mechanisms.”, J Med Microbiol, vol. 59, no. Pt 1, pp. 8-16, 2010.

P. S. Askovich, Ramsey, S. A., Diercks, A. H., Kennedy, K. A., Knijnenburg, T. A., and Aderem, A., “Identifying novel transcription factors involved in the inflammatory response by using binding site motif scanning in genomic regions defined by histone acetylation.”, PLoS One, vol. 12, no. 9, p. e0184850, 2017.

L. D. Koller, Stang, B. V., Hall, J. A., de la Paz, M. Posada, and Mendez, M. V. Ruiz, “Immunoglobulin and autoantibody responses in MRL/lpr mice treated with 'toxic oils'.”, Toxicology, vol. 178, no. 2, pp. 119-33, 2002.

Q. Wang, Yin, H., Camelliti, P., Betts, C., Moulton, H. M., Lee, H., Saleh, A. F., Gait, M. J., and Wood, M. J. A., “In vitro evaluation of novel antisense oligonucleotides is predictive of in vivo exon skipping activity for Duchenne muscular dystrophy.”, J Gene Med, vol. 12, no. 4, pp. 354-64, 2010.

M. L. Kent, Watral, V., Wu, M., and Bermudez, L. E., “In vivo and in vitro growth of Mycobacterium marinum at homoeothermic temperatures.”, FEMS Microbiol Lett, vol. 257, no. 1, pp. 69-75, 2006.

L. Danelishvili, Young, L. S., and Bermudez, L. E., “In vivo efficacy of phage therapy for Mycobacterium avium infection as delivered by a nonvirulent mycobacterium.”, Microb Drug Resist, vol. 12, no. 1, pp. 1-6, 2006.

J. L. Johns, Macnamara, K. C., Walker, N. J., Winslow, G. M., and Borjesson, D. L., “Infection with Anaplasma phagocytophilum induces multilineage alterations in hematopoietic progenitor cells and peripheral blood cells.”, Infect Immun, vol. 77, no. 9, pp. 4070-80, 2009.

K. Rahman, Vengrenyuk, Y., Ramsey, S. A., Vila, N. Rotllan, Girgis, N. M., Liu, J., Gusarova, V., Gromada, J., Weinstock, A., Moore, K. J., Loke, P. 'ng, and Fisher, E. A., “Inflammatory Ly6Chi monocytes and their conversion to M2 macrophages drive atherosclerosis regression.”, J Clin Invest, vol. 127, no. 8, pp. 2904-2915, 2017.

A. L. Palmer, de Jong, A., Leestemaker, Y., Geurink, P. P., Wijdeven, R. H., Ovaa, H., and Dolan, B. P., “Inhibition of the Deubiquitinase Usp14 Diminishes Direct MHC Class I Antigen Presentation.”, J Immunol, vol. 200, no. 3, pp. 928-936, 2018.

C. A. M. Silva, Danelishvili, L., McNamara, M., Berredo-Pinho, M., Bildfell, R., Biet, F., Rodrigues, L. S., Oliveira, A. V., Bermudez, L. E., and Pessolani, M. C. V., “Interaction of Mycobacterium leprae with human airway epithelial cells: adherence, entry, survival, and identification of potential adhesins by surface proteome analysis.”, Infect Immun, vol. 81, no. 7, pp. 2645-59, 2013.

A. R. Weatherill, Stang, B. V., O'Hara, K., Koller, L. D., and Hall, J. A., “Investigating the onset of autoimmunity in A.SW mice following treatment with 'toxic oils'.”, Toxicol Lett, vol. 136, no. 3, pp. 205-16, 2003.