Carlson College of Veterinary Medicine

T. E. Putman, Suchland, R. J., Ivanovitch, J. D., and Rockey, D. D., “Culture-independent sequence analysis of Chlamydia trachomatis in urogenital specimens identifies regions of recombination and in-patient sequence mutations.”, Microbiology (Reading), vol. 159, no. Pt 10, pp. 2109-2117, 2013.

D. T. Alzhanov, Weeks, S. K., Burnett, J. R., and Rockey, D. D., “Cytokinesis is blocked in mammalian cells transfected with Chlamydia trachomatis gene CT223.”, BMC Microbiol, vol. 9, p. 2, 2009.

D. T. Alzhanov, Weeks, S. K., Burnett, J. R., and Rockey, D. D., “Cytokinesis is blocked in mammalian cells transfected with Chlamydia trachomatis gene CT223.”, BMC microbiology, vol. 9, p. 2, 2009.

D. Hwang, Rust, A. G., Ramsey, S. A., Smith, J. J., Leslie, D. M., Weston, A. D., de Atauri, P., Aitchison, J. D., Hood, L., Siegel, A. F., and Bolouri, H., “A data integration methodology for systems biology.”, Proc Natl Acad Sci U S A, vol. 102, no. 48, pp. 17296-301, 2005.

D. Hwang, Rust, A. G., Ramsey, S. A., Smith, J. J., Leslie, D. M., Weston, A. D., de Atauri, P., Aitchison, J. D., Hood, L., Siegel, A. F., and Bolouri, H., “A data integration methodology for systems biology.”, Proc Natl Acad Sci U S A, vol. 102, no. 48, pp. 17296-301, 2005.

D. Hwang, Smith, J. J., Leslie, D. M., Weston, A. D., Rust, A. G., Ramsey, S. A., de Atauri, P., Siegel, A. F., Bolouri, H., Aitchison, J. D., and Hood, L., “A data integration methodology for systems biology: experimental verification.”, Proc Natl Acad Sci U S A, vol. 102, no. 48, pp. 17302-7, 2005.

D. Hwang, Smith, J. J., Leslie, D. M., Weston, A. D., Rust, A. G., Ramsey, S. A., de Atauri, P., Siegel, A. F., Bolouri, H., Aitchison, J. D., and Hood, L., “A data integration methodology for systems biology: experimental verification.”, Proc Natl Acad Sci U S A, vol. 102, no. 48, pp. 17302-7, 2005.

R. J. Suchland, Dimond, Z. E., Putman, T. E., and Rockey, D. D., “Demonstration of Persistent Infections and Genome Stability by Whole-Genome Sequencing of Repeat-Positive, Same-Serovar Chlamydia trachomatis Collected From the Female Genital Tract.”, J Infect Dis, vol. 215, no. 11, pp. 1657-1665, 2017.

E. Fu, Ramsey, S. A., and Yager, P., “Dependence of the signal amplification potential of colloidal gold nanoparticles on resonance wavelength in surface plasmon resonance-based detection.”, Anal Chim Acta, vol. 599, no. 1, pp. 118-23, 2007.

C. Stephen, Ribble, C. S., and Kent, M. L., “Descriptive epidemiology of marine anemia in seapen-reared salmon in southern British Columbia.”, Can Vet J, vol. 37, no. 7, pp. 420-5, 1996.

R. J. Suchland, Rockey, D. D., Weeks, S. K., Alzhanov, D. T., and Stamm, W. E., “Development of secondary inclusions in cells infected by Chlamydia trachomatis.”, Infect Immun, vol. 73, no. 7, pp. 3954-62, 2005.

R. J. Suchland, Rockey, D. D., Weeks, S. K., Alzhanov, D. T., and Stamm, W. E., “Development of secondary inclusions in cells infected by Chlamydia trachomatis.”, Infection and immunity, vol. 73, no. 7, pp. 3954-62, 2005.

Y. Wang, LaBrie, S. D., Carrell, S. J., Suchland, R. J., Dimond, Z. E., Kwong, F., Rockey, D. D., P Hefty, S., and Hybiske, K., “Development of Transposon Mutagenesis for Chlamydia muridarum.”, J Bacteriol, vol. 201, no. 23, 2019.

C. F. Cuff, Cebra, C. K., Rubin, D. H., and Cebra, J. J., “Developmental relationship between cytotoxic alpha/beta T cell receptor-positive intraepithelial lymphocytes and Peyer's patch lymphocytes.”, European journal of immunology, vol. 23, no. 6, pp. 1333-9, 1993.

A. J. Singh, Ramsey, S. A., Filtz, T. M., and Kioussi, C., “Differential gene regulatory networks in development and disease.”, Cell Mol Life Sci, vol. 75, no. 6, pp. 1013-1025, 2018.

R. A. Heinzen, Scidmore, M. A., Rockey, D. D., and Hackstadt, T., “Differential interaction with endocytic and exocytic pathways distinguish parasitophorous vacuoles of Coxiella burnetii and Chlamydia trachomatis.”, Infect Immun, vol. 64, no. 3, pp. 796-809, 1996.

R. A. Heinzen, Scidmore, M. A., Rockey, D. D., and Hackstadt, T., “Differential interaction with endocytic and exocytic pathways distinguish parasitophorous vacuoles of Coxiella burnetii and Chlamydia trachomatis.”, Infection and immunity, vol. 64, no. 3, pp. 796-809, 1996.

A. Morgun, Shulzhenko, N., Silva, I. D. C. G., Rampim, G. F., Chinellato, A. P., Borra, R. C., and Gerbase-Delima, M., “Differentially expressed genes in cardiac transplant biopsies and in mixed lymphocyte culture.”, Transplantation proceedings, vol. 34, no. 2, pp. 471-3, 2002.

C. Ostertag-Hill, Fang, L., Izume, S., Lee, M., Reed, A., and Jin, L., “Differentiation of BHV-1 isolates from vaccine virus by high-resolution melting analysis”, Virus Research, vol. 198C, pp. 1-8, 2014.

T. C. Reluga, Medlock, J., and Galvani, A., “The discounted reproductive number for epidemiology.”, Mathematical biosciences and engineering : MBE, vol. 6, no. 2, pp. 377-93, 2009.

D. D. Rockey, Viratyosin, W., Bannantine, J. P., Suchland, R. J., and Stamm, W. E., “Diversity within inc genes of clinical Chlamydia trachomatis variant isolates that occupy non-fusogenic inclusions.”, Microbiology (Reading), vol. 148, no. Pt 8, pp. 2497-2505, 2002.

D. D. Rockey, Viratyosin, W., Bannantine, J. P., Suchland, R. J., and Stamm, W. E., “Diversity within inc genes of clinical Chlamydia trachomatis variant isolates that occupy non-fusogenic inclusions.”, Microbiology (Reading, England), vol. 148, no. Pt 8, pp. 2497-505, 2002.

S. A. Ramsey, Orrell, D., and Bolouri, H., “Dizzy: stochastic simulation of large-scale genetic regulatory networks.”, J Bioinform Comput Biol, vol. 3, no. 2, pp. 415-36, 2005.

S. A. Ramsey, Orrell, D., and Bolouri, H., “Dizzy: stochastic simulation of large-scale genetic regulatory networks (supplementary material).”, J Bioinform Comput Biol, vol. 3, no. 2, pp. 437-54, 2005.

J. Yang and Ramsey, S. A., “A DNA shape-based regulatory score improves position-weight matrix-based recognition of transcription factor binding sites.”, Bioinformatics, vol. 31, no. 21, pp. 3445-50, 2015.