Carlson College of Veterinary Medicine

S. A. Ramsey, “A Method for Cross-Species Visualization and Analysis of RNA-Sequence Data.”, Methods Mol Biol, vol. 1702, pp. 291-305, 2018.

L. Danelishvili, Rojony, R., Carson, K. L., Palmer, A. L., Rose, S. J., and Bermudez, L. E., “Mycobacterium avium subsp. hominissuis effector MAVA5_06970 promotes rapid apoptosis in secondary-infected macrophages during cell-to-cell spread.”, Virulence, vol. 9, no. 1, pp. 1287-1300, 2018.

R. R. Rodrigues, Shulzhenko, N., and Morgun, A., “Transkingdom Networks: A Systems Biology Approach to Identify Causal Members of Host-Microbiota Interactions.”, Methods Mol Biol, vol. 1849, pp. 227-242, 2018.

J. J. Smith, Fletcher, D. J., Cooley, S. D., and Thompson, M. S., “Transpalpebral ultrasonographic measurement of the optic nerve sheath diameter in healthy dogs.”, J Vet Emerg Crit Care (San Antonio), vol. 28, no. 1, pp. 31-38, 2018.

N. C. Reynolds, Zhong, J. Y., Clendinen, C. A., Moffat, S. D., and Magnusson, K. R., “Age-related differences in brain activations during spatial memory formation in a well-learned virtual Morris water maze (vMWM) task.”, Neuroimage, vol. 202, p. 116069, 2019.

Y. Yao, Liu, Z., Wei, Q., and Ramsey, S. A., “CERENKOV2: improved detection of functional noncoding SNPs using data-space geometric features.”, BMC Bioinformatics, vol. 20, no. 1, p. 63, 2019.

S. S. Chiplunkar, Silva, C. A., Bermudez, L. E., and Danelishvili, L., “Characterization of membrane vesicles released by Mycobacterium avium in response to environment mimicking the macrophage phagosome.”, Future Microbiol, vol. 14, pp. 293-313, 2019.

A. Al Fatease, Shah, V., Nguyen, D. X., Cote, B., LeBlanc, N., Rao, D. A., and Alani, A. W. G., “Chemosensitization and mitigation of Adriamycin-induced cardiotoxicity using combinational polymeric micelles for co-delivery of quercetin/resveratrol and resveratrol/curcumin in ovarian cancer.”, Nanomedicine, vol. 19, pp. 39-48, 2019.

Q. Wei, Ramsey, S. A., Larson, M. K., Berlow, N. E., Ochola, D., Shiprack, C., Kashyap, A., Séguin, B., Keller, C., and Löhr, C. V., “Elucidating the transcriptional program of feline injection-site sarcoma using a cross-species mRNA-sequencing approach.”, BMC Cancer, vol. 19, no. 1, p. 311, 2019.

L. Louis Seifert, Si, C., Saha, D., Sadic, M., de Vries, M., Ballentine, S., Briley, A., Wang, G., Valero-Jimenez, A. M., Mohamed, A., Schaefer, U., Moulton, H. M., García-Sastre, A., Tripathi, S., Rosenberg, B. R., and Dittmann, M., “The ETS transcription factor ELF1 regulates a broadly antiviral program distinct from the type I interferon response.”, PLoS Pathog, vol. 15, no. 11, p. e1007634, 2019.

B. P. Dolan, “Quantitating MHC Class I Ligand Production and Presentation Using TCR-Like Antibodies.”, Methods Mol Biol, vol. 1988, pp. 149-157, 2019.

Z. Liu, Yao, Y., Wei, Q., Weeder, B., and Ramsey, S. A., “Res2s2aM: Deep residual network-based model for identifying functional noncoding SNPs in trait-associated regions.”, Pac Symp Biocomput, vol. 24, pp. 76-87, 2019.

M. W. Mutuku, Laidemitt, M. R., Beechler, B. R., Mwangi, I. N., Otiato, F. O., Agola, E. L., Ochanda, H., Kamel, B., Mkoji, G. M., Steinauer, M. L., and Loker, E. S., “A Search for Snail-Related Answers to Explain Differences in Response of to Praziquantel Treatment among Responding and Persistent Hotspot Villages along the Kenyan Shore of Lake Victoria.”, Am J Trop Med Hyg, vol. 101, no. 1, pp. 65-77, 2019.

J. - Da Lin, Nishi, H., Poles, J., Niu, X., Mccauley, C., Rahman, K., Brown, E. J., Yeung, S. T., Vozhilla, N., Weinstock, A., Ramsey, S. A., Fisher, E. A., and Loke, P. 'ng, “Single-cell analysis of fate-mapped macrophages reveals heterogeneity, including stem-like properties, during atherosclerosis progression and regression.”, JCI Insight, vol. 4, no. 4, 2019.

H. Limburg, Harbig, A., Bestle, D., Stein, D. A., Moulton, H. M., Jaeger, J., Janga, H., Hardes, K., Koepke, J., Schulte, L., Koczulla, A. Rembert, Schmeck, B., Klenk, H. - D., and Böttcher-Friebertshäuser, E., “TMPRSS2 Is the Major Activating Protease of Influenza A Virus in Primary Human Airway Cells and Influenza B Virus in Human Type II Pneumocytes.”, J Virol, vol. 93, no. 21, 2019.

Y. Yao and Ramsey, S. A., “CERENKOV3: Clustering and molecular network-derived features improve computational prediction of functional noncoding SNPs.”, Pac Symp Biocomput, vol. 25, pp. 535-546, 2020.

S. A. Ramsey, Liu, Z., Yao, Y., and Weeder, B., “Combining eQTL and SNP Annotation Data to Identify Functional Noncoding SNPs in GWAS Trait-Associated Regions.”, Methods Mol Biol, vol. 2082, pp. 73-86, 2020.

J. A. Hall, Isaiah, A., Bobe, G., Estill, C. T., Bishop-Stewart, J. K., T Davis, Z., Suchodolski, J. S., and Pirelli, G. J., “Feeding selenium-biofortified alfalfa hay during the preconditioning period improves growth, carcass weight, and nasal microbial diversity of beef calves.”, PLoS One, vol. 15, no. 12, p. e0242771, 2020.

T. J. Sharpton, Combrink, L., Arnold, H. K., Gaulke, C. A., and Kent, M. L., “Harnessing the gut microbiome in the fight against anthelminthic drug resistance.”, Curr Opin Microbiol, vol. 53, pp. 26-34, 2020.

A. L. Sirochman, Milovancev, M., Townsend, K. L., and Grimes, J. A., “Influence of use of a bipolar vessel sealing device on short-term postoperative mortality after splenectomy: 203 dogs (2005-2018).”, Vet Surg, vol. 49, no. 2, pp. 291-303, 2020.

R. Adler, Clark, E., Cline, M., Conner, M., Crabbs, T., Fossey, S., Malarkey, D., Meseck, E., Vernau, W., Tornquist, S. J., McDorman, K., Rees, S., and Cockerell, G., “Mission Accomplished: The ACVP/STP Coalition for Veterinary Pathology Fellows Completes Its Objectives, but Its Legacy and Spirit Live On.”, Vet Pathol, vol. 57, no. 4, pp. 472-475, 2020.

P. Sitthicharoenchai, Alnajjar, S., and Ackermann, M. R., “A model of respiratory syncytial virus (RSV) infection of infants in newborn lambs.”, Cell Tissue Res, vol. 380, no. 2, pp. 313-324, 2020.

M. Gurung, Li, Z., You, H., Rodrigues, R., Jump, D. B., Morgun, A., and Shulzhenko, N., “Role of gut microbiota in type 2 diabetes pathophysiology.”, EBioMedicine, vol. 51, p. 102590, 2020.

D. Bestle, Heindl, M. Ruth, Limburg, H., van, T. Van Lam, Pilgram, O., Moulton, H. M., Stein, D. A., Hardes, K., Eickmann, M., Dolnik, O., Rohde, C., Klenk, H. - D., Garten, W., Steinmetzer, T., and Böttcher-Friebertshäuser, E., “TMPRSS2 and furin are both essential for proteolytic activation of SARS-CoV-2 in human airway cells.”, Life Sci Alliance, vol. 3, no. 9, 2020.

G. Green, Johnson, S. M., Costello, H., Brakel, K., Harder, O., Oomens, A. G., Peeples, M. E., Moulton, H. M., and Niewiesk, S., “CX3CR1 Is a Receptor for Human Respiratory Syncytial Virus in Cotton Rats.”, J Virol, vol. 95, no. 16, p. e0001021, 2021.